Professional Experience

Projects

  • Novel epigenetic regulators in metabolic diseases and chronic inflammation:
    Using both beta cells and mouse models, investigates the epigenomic regulation of cellular dysfunction in diabetes and metabolic diseases, and studies the fundamental mechanisms of transcription and chromatin biology.
  • Single-cell Transcriptomics, Epigenomics and Proteomics:
    Much of the effort is focused on development and application of novel statistical methods and computational tools for understanding tissue function, including analysis of multi-omics datasets.

Recent Publications

  • Bromodomain containing 9 (BRD9) regulates macrophage inflammatory responses by potentiating glucocorticoid receptor activity
    Liu Wang,Tae Gyu Oh, Jason Magida, Gabriela Estepa, SM Bukola Obayomi, Ling-Wa Chong, Jovylyn Gatchalian, Ruth T Yu, Annette R Atkins, Diana Hargreaves, Michael Downes, Zong Wei, Ronald M Evans (2021) Proceedings of the National Academy of Sciences, e2109517118.

    Link

  • Exploring the trans‐cleavage activity of CRISPR‐Cas12a (cpf1) for the development of a universal electrochemical biosensor
    Yifan Dai, Rodrigo A Somoza, Liu Wang, Jean F Welter, Yan Li, Arnold I Caplan, Chung Chiun Liu (2019) Angewandte Chemie, 17560-17566.

    Link

  • Cisplatin-induced DNA double-strand breaks promote meiotic chromosome synapsis in PRDM9-controlled mouse hybrid sterility
    Liu Wang, Barbora Valiskova, Jiri Forejt (2018) Elife, e42511.

    Link

Professional Activity

  • Editorial Board
    2023-Present: Human Fertility, Editorial Board Member.
  • Guest Editorship
    2021-2023: Frontiers in Endocrinology, Guest Associate Editor, Research Topic: Application of Multi-omics Analysis in Gametogenesis and the Relevant Human Infertility Diseases.
  • Journal Reviewer
    Frontiers in Endocrinology, Molecular Biology Reports, Reproduction in Domestic Animals, Genetic Testing and Molecular Biomarkers, Endocrine, PLOS ONE, Disease Markers, Frontiers in Genetics, Frontiers in Cardiovascular Medicine, Frontiers in Oncology, Genes & Genetic Systems, Frontiers in Reproductive Health,eLife,Human Fertility,Journal of Advanced Research

Skills

  • Programming Languages:
  • Python, R, Shell, C++, Perl

  • Sequencing Data Anlaysis:
  • scRNA-seq, scATAC-seq, CUT&RUN,RNA-seq, ChIP-seq,Paired-Tag,ATAC-seq,CROP-seq

  • Machine Learning:
  • Dimensionality Reduction, Data Visualization

    Training Experience

  • 2023 Data Structures and Algorithms. Arizona State University
  • 2021 Mayo Clinic & Illinois Alliance 2021 Computational Genomics Course
  • 2018 Genome Assembly Course. Charles University
  • 2017 Course on UNIX and Genomic Data(NGS) Charles University, Prague
  • 2017 Pandas workshop. MSD IT, Prague
  • 2017 Summer School on RNA protein interactions RNA Structure and Biology workshop. CEITEC MU, University Campus Bohunice, Kamenice 5, Brno, Czech Republic
  • 2017 Course of Methods of Functional Genomics. Biology Centre CAS. University of South Bohemia České Budějovice.České Budějovice, Czech Republic.
  • 2017 BIOCEV: FLIM PRAGUE 2017, 2nd Workshop on Advanced Time Resolved Imaging Techniques in Vestec near Prague
  • 2016 Microscopy Methods in Biomedicine. Institute of Molecular Genetics of the ASCR, v. v. i. prague
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