Projects

  • Novel epigenetic regulators in metabolic diseases and chronic inflammation:
    Using both beta cells and mouse models, investigates the epigenomic regulation of cellular dysfunction in diabetes and metabolic diseases, and studies the fundamental mechanisms of transcription and chromatin biology.
  • Single-cell Transcriptomics, Epigenomics and Proteomics:
    Much of the effort is focused on development and application of novel statistical methods and computational tools for understanding tissue function, including analysis of multi-omics datasets.

Recent Publications

  • Heterogeneous enhancer states orchestrate β cell responses to metabolic stress
    Liu Wang* , Jie Wu*, Madeline Sramek, SM Bukola Obayomi, Peidong Gao, Yan Li, Aleksey V Matveyenko, Zong Wei(2024) Nature Communications,15(1):9361.

    Link

  • BET signaling and FXR signaling orchestrate to protect β cells
    Fritz Cayabyab, Jalan Tipirneni, David Chen, Jinhyuk Choi, Clarissa Tacto, Jie Wu, Liu Wang, Yeva Mirzakhanyan, Paul David Gershon, Harvey Perez, Kiyoka Kim, Sungsoon Fang, Eli Ipp, Lin-Feng Chen, Zong Wei, Eiji Yoshihara(2024) Under review.

    Link

  • A pulsed oscillator patterns epithelial fate in the alveolus
    Amitoj S Sawhney, Brian J Deskin, Junming Cai, Daniel Gibbard, Gibran Ali, Aaron Olson, Hannah Hausman, Liberty Sabol, Rachel Warren, Stijn De Langhe, Zintis Inde, Kristopher A Sarosiek, Evan Lemire, Adam Haber, Liu Wang, Zong Wei, Ria Shah, and Douglas G Brownfield.(2024) Under review.

    Link

  • 1773-P: Glucocorticoid Receptor Signaling Regulates Pancreatic Beta-Cell Circadian Transcriptome and Function
    SATISH K SEN, LIU WANG, MATTHEW BROWN, JIE WU, ZONG WEI, ALEKSEY MATVEYENKO (2023) Diabetes, 72.

    Link

  • Bromodomain containing 9 (BRD9) regulates macrophage inflammatory responses by potentiating glucocorticoid receptor activity
    Liu Wang,Tae Gyu Oh, Jason Magida, Gabriela Estepa, SM Bukola Obayomi, Ling-Wa Chong, Jovylyn Gatchalian, Ruth T Yu, Annette R Atkins, Diana Hargreaves, Michael Downes, Zong Wei, Ronald M Evans (2021) Proceedings of the National Academy of Sciences, e2109517118.

    Link

  • Exploring the trans‐cleavage activity of CRISPR‐Cas12a (cpf1) for the development of a universal electrochemical biosensor
    Yifan Dai, Rodrigo A Somoza, Liu Wang, Jean F Welter, Yan Li, Arnold I Caplan, Chung Chiun Liu (2019) Angewandte Chemie, 17560-17566.

    Link

  • Cisplatin-induced DNA double-strand breaks promote meiotic chromosome synapsis in PRDM9-controlled mouse hybrid sterility
    Liu Wang, Barbora Valiskova, Jiri Forejt (2018) Elife, e42511.

    Link

Professional Activity

  • Editorial Board
    2023-Present: Human Fertility, Editorial Board Member.
  • Guest Editorship
    2021-2023: Frontiers in Endocrinology, Guest Associate Editor, Research Topic: Application of Multi-omics Analysis in Gametogenesis and the Relevant Human Infertility Diseases.
  • Journal Reviewer
    Frontiers in Endocrinology, Molecular Biology Reports, Reproduction in Domestic Animals, Genetic Testing and Molecular Biomarkers, Endocrine, PLOS ONE, Disease Markers, Frontiers in Genetics, Frontiers in Cardiovascular Medicine, Frontiers in Oncology, Genes & Genetic Systems, Frontiers in Reproductive Health,eLife,Human Fertility,Journal of Advanced Research

Skills

  • Computing Skills:
  • R, Shell, Git, Python, Perl, C++

  • Sequencing Data Anlaysis:
  • scRNA-seq, scATAC-seq, CUT&RUN,RNA-seq, ChIP-seq,Paired-Tag,ATAC-seq,CROP-seq

  • Machine Learning:
  • Dimensionality Reduction, Data Visualization

    Contact